STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_1990Conserved hypothetical protein. (69 aa)    
Predicted Functional Partners:
Bpro_1105
Histone H1-like protein.
  
     0.615
Bpro_2100
Conserved hypothetical protein.
  
     0.602
Bpro_1488
Protein of unknown function DUF1228.
  
     0.529
Bpro_3117
Porin, Gram-negative type.
  
     0.472
Bpro_1989
Hypothetical protein.
       0.459
Bpro_0388
Putative lipoprotein transmembrane.
  
     0.453
Bpro_2359
Hypothetical protein.
  
     0.439
Bpro_0724
Putative transmembrane protein.
  
    0.413
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.