STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2011Protein of unknown function DUF112, transmembrane. (501 aa)    
Predicted Functional Partners:
Bpro_2012
Twin-arginine translocation pathway signal.
 
    0.933
Bpro_2009
Uncharacterized protein UPF0065.
 
    0.914
Bpro_2010
Conserved hypothetical membrane protein.
  
  
 0.868
Bpro_0620
Uncharacterized protein UPF0065.
 
    0.820
Bpro_2849
Uncharacterized protein UPF0065.
 
    0.819
Bpro_3516
Uncharacterized protein UPF0065.
 
    0.817
Bpro_4513
Uncharacterized protein UPF0065.
 
    0.815
Bpro_4314
Uncharacterized protein UPF0065.
 
    0.814
Bpro_1233
Uncharacterized protein UPF0065.
 
    0.813
Bpro_4137
Uncharacterized protein UPF0065.
 
    0.810
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.