STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2016UDP-galactopyranose mutase. (426 aa)    
Predicted Functional Partners:
Bpro_2017
Farnesyl-diphosphate farnesyltransferase.
 
    0.929
Bpro_2018
Squalene/phytoene synthase.
 
  
 0.885
Bpro_3636
Putative transmembrane protein.
  
     0.640
Bpro_0430
Protein of unknown function DUF583.
  
     0.614
Bpro_4585
Conserved hypothetical protein.
  
     0.594
Bpro_1065
Hypothetical protein.
  
     0.568
Bpro_4300
Conserved hypothetical protein.
  
     0.493
Bpro_2439
Conserved hypothetical protein.
  
     0.476
Bpro_3661
Putative porphyrin biosynthesis related protein.
  
     0.475
Bpro_1138
CheW-like protein.
  
     0.462
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.