STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2020Extracellular solute-binding protein, family 1. (363 aa)    
Predicted Functional Partners:
Bpro_2022
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.936
Bpro_4359
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.928
Bpro_2021
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.916
Bpro_4377
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.842
Bpro_4417
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.837
Bpro_3945
Binding-protein-dependent transport systems inner membrane component.
 
 
 0.833
Bpro_3946
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.810
Bpro_4378
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.810
Bpro_4418
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.804
Bpro_1009
Binding-protein-dependent transport systems inner membrane component.
 
  
 0.774
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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