STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2082Anti-sigma-factor antagonist (STAS) domain protein. (566 aa)    
Predicted Functional Partners:
Bpro_2468
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.988
Bpro_4465
Adenylate/guanylate cyclase.
 
 
 0.982
Bpro_0212
Multi-sensor hybrid histidine kinase.
 
 
 0.975
Bpro_0308
Diguanylate cyclase/phosphodiesterase.
  
  
 0.964
Bpro_4463
Multi-sensor hybrid histidine kinase.
 
 
 0.962
Bpro_4824
Response regulator receiver sensor signal transduction histidine kinase.
 
 
 0.959
Bpro_2466
CheA signal transduction histidine kinase.
 
 
 0.958
Bpro_2469
Response regulator receiver (CheY-like) modulated diguanylate phosphodiesterase (EAL domain).
  
 
 0.958
Bpro_4825
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.958
Bpro_2390
PAS/PAC sensor hybrid histidine kinase.
 
 
 0.955
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.