STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2139Poly(R)-hydroxyalkanoic acid synthase, class I. (580 aa)    
Predicted Functional Partners:
Bpro_2141
Acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.977
Bpro_1839
Intracellular polyhydroxyalkanoate depolymerase.
 
  
 0.967
Bpro_1198
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.966
Bpro_2173
Polyhydroxyalkanoate depolymerase, intracellular.
 
  
 0.961
Bpro_1202
Poly-beta-hydroxybutyrate polymerase-like protein.
  
  
 
0.917
Bpro_3016
3-hydroxyacyl-CoA dehydrogenase.
   
 
 0.914
Bpro_2702
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.837
Bpro_3621
Patatin.
 
   
 0.697
Bpro_0732
Patatin.
 
   
 0.684
Bpro_2140
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.630
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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