Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bpro_2152Peptidase M14, carboxypeptidase A. (615 aa)    
Predicted Functional Partners:
Bpro_2250
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.
  
     0.753
Bpro_2659
ABC-type transport system ipermease component.
  
     0.752
Bpro_4469
Transporter, CPA2 family; TC 2.A.37.
  
    0.738
Bpro_2658
ABC-type transport system periplasmic component.
  
     0.710
Bpro_3349
Hypothetical protein.
  
    0.654
Bpro_4631
Histidine kinase.
  
     0.613
Bpro_4558
Porin, Gram-negative type.
  
     0.577
Bpro_1991
Hypothetical protein.
  
     0.567
Bpro_3050
Hypothetical protein.
  
   
 0.543
Bpro_1360
Hypothetical protein.
  
     0.528
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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