STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2250Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-. (381 aa)    
Predicted Functional Partners:
Bpro_3349
Hypothetical protein.
  
     0.758
Bpro_2152
Peptidase M14, carboxypeptidase A.
  
     0.753
Bpro_2264
RecB family exonuclease-like protein.
  
     0.753
Bpro_4047
Response regulator receiver domain protein (CheY-like).
  
     0.753
Bpro_4558
Porin, Gram-negative type.
  
     0.751
Bpro_4564
MltA-interacting MipA.
  
     0.742
Bpro_0746
Outer membrane protein (porin)-like protein.
  
     0.740
Bpro_2265
UvrD/REP helicase.
  
     0.736
Bpro_3822
Hypothetical protein.
  
     0.729
Bpro_1181
Hypothetical protein.
  
     0.721
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.