STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2391Erythromycin esterase. (452 aa)    
Predicted Functional Partners:
Bpro_2392
Phosphoribosyltransferase.
     0.984
pcm2
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
      0.796
Bpro_2756
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.778
pcm1
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
      0.703
Bpro_3060
protein-L-isoaspartate O-methyltransferase.
      0.489
Bpro_2389
Response regulator receiver domain protein (CheY-like).
       0.469
Bpro_2390
PAS/PAC sensor hybrid histidine kinase.
       0.469
Bpro_3859
Putative capsule biosynthesis protein.
  
     0.449
Bpro_2393
Lysine exporter protein (LYSE/YGGA).
       0.413
Bpro_2394
Protein of unknown function DUF1272.
       0.413
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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