STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2658ABC-type transport system periplasmic component. (346 aa)    
Predicted Functional Partners:
Bpro_2659
ABC-type transport system ipermease component.
 
 0.995
Bpro_0231
ABC transporter related protein.
 
 0.934
Bpro_0230
Protein of unknown function DUF140.
 
 0.923
Bpro_0793
ABC transporter related protein.
  
 0.922
Bpro_0232
Mammalian cell entry related protein.
  
  
  0.911
Bpro_0794
Protein of unknown function DUF140.
  
 0.909
Bpro_0795
Mammalian cell entry related protein.
     
 0.906
Bpro_0797
Toluene tolerance.
  
 0.898
Bpro_2657
Conserved hypothetical protein.
       0.864
Bpro_0798
Anti-sigma-factor antagonist (STAS) domain protein.
  
 0.856
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.