STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2674Two component transcriptional regulator, LuxR family. (208 aa)    
Predicted Functional Partners:
Bpro_2673
Multi-sensor signal transduction histidine kinase.
 
 
 0.923
Bpro_4653
Signal transduction histidine kinase, nitrogen specific, NtrB.
 
 
 0.691
Bpro_4100
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.680
folD
5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
  
    0.625
Bpro_2468
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.548
Bpro_4825
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.486
Bpro_0999
Periplasmic sensor signal transduction histidine kinase.
  
 
 0.436
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.