STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (373 aa)    
Predicted Functional Partners:
Bpro_2773
Cobalamin (vitamin B12) biosynthesis CbiG protein.
 
 
 0.998
Bpro_2769
Cobalamin (vitamin B12) biosynthesis CbiG protein.
 
 
 0.997
Bpro_2775
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.995
Bpro_2777
precorrin-8X methylmutase.
 
  
 0.988
Bpro_2779
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.986
Bpro_2774
Cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase; Methylates precorrin-2 at the C-20 position to produce precorrin-3A.
 
  
 0.980
cobQ
Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.961
Bpro_2785
Cobyrinate a,c-diamide synthase.
 
  
 0.961
Bpro_2778
Cobalamin (vitamin B12) biosynthesis CbiX protein.
 
   
 0.959
Bpro_2767
Precorrin-3 methyltransferase.
 
  
 0.941
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.