STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2880Putative type 4 fimbrial biogenesis pilw-related protein transmembrane. (391 aa)    
Predicted Functional Partners:
Bpro_2881
Putative type 4 fimbrial biogenesis related transmembrane protein.
 
  
 0.992
Bpro_2878
Putative type 4 fimbrial biogenesis PilY1-related protein signal peptide.
 
  
 0.990
Bpro_2882
Methylation.
 
  
 0.982
Bpro_2877
Methylation.
 
  
 0.956
Bpro_2876
Methylation.
 
  
 0.910
Bpro_2879
Putative transmembrane protein.
  
  
 0.822
Bpro_0782
Fimbrial assembly.
 
   
 0.661
Bpro_0784
Pilus assembly protein, PilQ.
  
  
 0.658
Bpro_0783
Pilus assembly protein, PilO.
 
  
 0.647
Bpro_2517
Type IV pilus assembly PilZ.
  
   
 0.644
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.