STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_2985Lysine exporter protein (LYSE/YGGA). (208 aa)    
Predicted Functional Partners:
Bpro_2988
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; TC 3.A.1.4.-.
       0.763
Bpro_2986
Amino acid/amide ABC transporter membrane protein 1, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.762
Bpro_2987
Amino acid/amide ABC transporter membrane protein 2, HAAT family; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.762
Bpro_2989
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; TC 3.A.1.4.-.
       0.762
Bpro_2990
Multi-sensor signal transduction histidine kinase.
  
    0.502
Bpro_2984
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; TC 3.A.1.4.-.
   
   0.444
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.