Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3000Monooxygenase, FAD-binding protein. (551 aa)    
Predicted Functional Partners:
Bpro_3718
Monooxygenase, FAD-binding protein.
  
  
 
0.921
Bpro_4535
Monooxygenase, FAD-binding protein.
  
  
 
0.913
Bpro_0666
Beta-lactamase-like protein.
 
    0.814
Bpro_4534
Beta-lactamase-like protein.
 
    0.814
Bpro_4536
Conserved hypothetical protein.
 
    0.792
Bpro_3719
Hypothetical protein.
 
    0.791
Bpro_2997
Homogentisate 1,2-dioxygenase.
 
  
 0.713
Bpro_2998
Transcriptional regulator, MarR family.
 
  
 0.627
Bpro_2996
Fumarylacetoacetate hydrolase.
 
  
 0.537
Bpro_3001
Chordin.
       0.467
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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