STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3110Transcriptional regulator, GntR family. (268 aa)    
Predicted Functional Partners:
Bpro_3219
Transcriptional regulator, GntR family.
  
  
 0.740
Bpro_2754
Transcriptional regulator, GntR family.
  
  
 0.739
Bpro_2295
Transcriptional regulator, GntR family.
  
  
 0.730
Bpro_1007
Transcriptional regulator, GntR family.
  
  
 0.710
Bpro_1284
Transcriptional regulator, GntR family.
  
     0.710
Bpro_0695
Transcriptional regulator, GntR family.
  
  
 0.704
Bpro_2134
Transcriptional regulator, GntR family.
  
  
 0.663
Bpro_3327
Transcriptional regulator, GntR family.
  
  
 0.661
Bpro_1052
Transcriptional regulator, GntR family.
  
  
 0.650
Bpro_3386
Transcriptional regulator, GntR family.
  
  
 0.643
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.