STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3166Hypothetical protein. (345 aa)    
Predicted Functional Partners:
Bpro_2468
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.758
Bpro_4825
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.746
parE
DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.
       0.560
Bpro_3898
Multi-sensor signal transduction histidine kinase.
   
 
 0.521
Bpro_3167
Major facilitator superfamily MFS_1.
       0.493
Bpro_4197
Multi-sensor signal transduction histidine kinase.
   
 
 0.478
Bpro_2390
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.453
Bpro_3164
Lytic transglycosylase, catalytic.
       0.433
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.