Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Bpro_3205Monosaccharide ABC transporter ATP-binding protein, CUT2 family; TC 3.A.1.2.-. (272 aa)    
Predicted Functional Partners:
Bpro_3204
Monosaccharide ABC transporter membrane protein, CUT2 family; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 0.999
Bpro_3203
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
 0.997
Bpro_3207
Conserved hypothetical protein.
 
   
 0.926
Bpro_0036
Transcriptional regulator, LacI family.
 
 
 0.897
Bpro_0698
Transcriptional regulator, LacI family.
 
 
 0.892
Bpro_3206
RbsD or FucU transport; Belongs to the RbsD / FucU family.
 
     0.829
Bpro_3202
PfkB.
 
  
 0.816
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
   
 
 0.794
rbsK
PfkB; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.515
Bpro_1285
Xylulokinase; Belongs to the FGGY kinase family.
 
  
 0.484
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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