STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3207Conserved hypothetical protein. (414 aa)    
Predicted Functional Partners:
Bpro_3203
Monosaccharide ABC transporter substrate-binding protein, CUT2 family; TC 3.A.1.2.-.
 
  
 0.927
Bpro_3205
Monosaccharide ABC transporter ATP-binding protein, CUT2 family; TC 3.A.1.2.-.
 
   
 0.927
Bpro_3204
Monosaccharide ABC transporter membrane protein, CUT2 family; TC 3.A.1.2.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.917
Bpro_3206
RbsD or FucU transport; Belongs to the RbsD / FucU family.
 
     0.894
Bpro_3202
PfkB.
 
  
 0.807
Bpro_2870
Protein of unknown function DUF980; Belongs to the MtfA family.
    
 
 0.576
Bpro_0698
Transcriptional regulator, LacI family.
 
  
 0.553
Bpro_0036
Transcriptional regulator, LacI family.
 
  
 0.501
Bpro_3970
Mannitol dehydrogenase-like protein.
 
  
 0.495
Bpro_3815
Carbohydrate ABC transporter substrate-binding protein, CUT1 family; TC 3.A.1.1.-.
 
  
 0.465
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.