STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3238ABC transporter related protein. (594 aa)    
Predicted Functional Partners:
Bpro_0383
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; Belongs to the ABC transporter superfamily.
 
     
0.711
Bpro_2502
Manganese and iron superoxide dismutase.
  
 
 0.708
Bpro_3906
ABC transporter related protein.
  
 
0.583
Bpro_3237
Transcriptional regulator, MarR family.
  
  
 0.569
cysA
Sulphate transport system permease protein 1; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
     
0.559
Bpro_3239
Glu/Leu/Phe/Val dehydrogenase, C terminal protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.525
Bpro_1548
AAA ATPase, central region; Belongs to the AAA ATPase family.
 
 
 0.498
Bpro_3393
AMP-dependent synthetase and ligase.
  
 0.486
Bpro_3224
Protein of unknown function DUF214.
 
   
 0.466
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.451
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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