STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3268Nitrate transport permease. (328 aa)    
Predicted Functional Partners:
Bpro_3269
Nitrate transport ATP-binding subunits C and D.
 
 0.995
Bpro_3267
Twin-arginine translocation pathway signal.
 
 
 0.994
Bpro_0290
Nitrate transport ATP-binding subunits C and D.
 
 0.986
Bpro_0292
ABC transporter nitrate-binding protein.
 
 
 0.985
Bpro_0291
Nitrate transport permease.
  
  
 
0.909
Bpro_4592
Respiratory nitrate reductase gamma subunit.
     
  0.900
Bpro_4594
Respiratory nitrate reductase beta subunit.
     
  0.900
Bpro_4595
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
Bpro_2932
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein.
 
  
 0.855
Bpro_1045
ABC transporter related protein.
  
 0.853
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.