STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3489Conserved hypothetical protein. (118 aa)    
Predicted Functional Partners:
Bpro_3487
Blue (type 1) copper domain.
     0.983
Bpro_3484
Putative copper resistance-related lipoprotein.
 
 
 0.904
Bpro_3485
Twin-arginine translocation pathway signal.
 
   
 0.895
Bpro_3488
Protein of unknown function DUF411.
 
   
 0.833
Bpro_3491
Heavy metal efflux pump CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.613
Bpro_3492
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.522
Bpro_3486
Hypothetical protein.
       0.513
Bpro_3483
Hypothetical protein.
       0.501
Bpro_3493
Outer membrane efflux protein.
 
 
 0.489
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.