STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3525Gluconate kinase, SKI family. (184 aa)    
Predicted Functional Partners:
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
  
 
 0.934
Bpro_4512
Gluconolactonase.
    
 0.911
Bpro_1736
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
    
 0.903
Bpro_3078
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein.
    
 0.903
Bpro_3874
Putative hemagglutinin-related protein.
    
 0.903
Bpro_3524
Short-chain dehydrogenase/reductase SDR.
 
  
 0.899
Bpro_3526
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; TC 3.A.1.1.-; Belongs to the ABC transporter superfamily.
     
 0.778
rpiA
Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
    
 0.772
Bpro_3527
Carbohydrate ABC transporter membrane protein 2, CUT1 family; TC 3.A.1.1.-.
     
 0.748
Bpro_3523
Alcohol dehydrogenase GroES-like protein.
 
  
 0.707
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.