STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3901L-glutamate ABC transporter ATP-binding protein. (245 aa)    
Predicted Functional Partners:
Bpro_3902
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 0.995
Bpro_3903
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 0.994
Bpro_3904
Amino acid ABC transporter substrate-binding protein, PAAT family; TC 3.A.1.3.-.
 
 0.986
Bpro_3132
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.846
Bpro_1389
Amino acid ABC transporter membrane protein 1, PAAT family; TC 3.A.1.3.-.
 
 0.844
Bpro_0402
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.843
Bpro_1039
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.842
Bpro_1388
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 0.842
Bpro_0693
Amino acid ABC transporter membrane protein 2, PAAT family; TC 3.A.1.3.-.
 
 0.841
Bpro_2726
Amino acid ABC transporter membrane protein, PAAT family; TC 3.A.1.3.-.
 
 0.838
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.