STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_3932Enoyl-CoA hydratase. (274 aa)    
Predicted Functional Partners:
Bpro_3933
Conserved hypothetical protein.
  
 
 0.753
Bpro_3953
Acetyl-CoA C-acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.608
Bpro_3931
Short-chain dehydrogenase/reductase SDR.
  
  0.569
Bpro_2468
PAS/PAC sensor hybrid histidine kinase.
  
 
 0.557
Bpro_2390
PAS/PAC sensor hybrid histidine kinase.
   
 
 0.541
Bpro_0563
Periplasmic sensor hybrid histidine kinase.
   
 
 0.535
Bpro_1353
Periplasmic sensor hybrid histidine kinase.
   
 
 0.535
Bpro_3957
acyl-CoA dehydrogenase-like protein.
 
 0.499
Bpro_1231
Beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.486
Bpro_1577
Acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.486
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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