STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4144Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (705 aa)    
Predicted Functional Partners:
Bpro_4145
Membrane protein-like protein.
 
    0.954
Bpro_4152
Putative signal-transduction protein with CBS domains.
 
  
 0.892
Bpro_3040
Putative membrane protein.
 
    0.808
Bpro_0532
Hypothetical protein.
  
  
 0.786
Bpro_4147
Hypothetical protein.
       0.624
Bpro_4146
Tetratricopeptide TPR_2.
       0.620
Bpro_4151
DNA polymerase III, epsilon subunit.
 
     0.619
Bpro_4149
Periplasmic sensor signal transduction histidine kinase.
  
  
 0.541
Bpro_4148
Conserved hypothetical protein.
       0.443
Bpro_1590
AMP-dependent synthetase and ligase.
 
  
 0.439
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.