STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4169Uncharacterized protein UPF0065. (319 aa)    
Predicted Functional Partners:
Bpro_3880
Protein of unknown function DUF112, transmembrane.
    0.783
Bpro_2797
Protein of unknown function DUF112, transmembrane.
    0.692
Bpro_4170
Conserved hypothetical protein.
       0.652
Bpro_4171
Protein of unknown function DUF1446.
       0.652
Bpro_3009
Protein of unknown function DUF112, transmembrane.
    0.651
Bpro_2011
Protein of unknown function DUF112, transmembrane.
    0.642
Bpro_3881
Protein of unknown function DUF1468.
 
    0.512
Bpro_4172
Hypothetical protein.
       0.475
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.