STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4234Conserved hypothetical protein. (203 aa)    
Predicted Functional Partners:
Bpro_4235
Protein of unknown function DUF6, transmembrane.
       0.806
Bpro_4236
Conserved hypothetical protein.
       0.773
Bpro_4237
Hypothetical protein.
       0.681
Bpro_4233
Transcriptional regulator, GntR family.
       0.598
Bpro_2113
Extracellular solute-binding protein, family 5.
  
     0.544
Bpro_4232
Hypothetical protein.
       0.523
Bpro_4238
DJ-1/PfpI family protein.
       0.480
Bpro_4242
Phenazine biosynthesis PhzC/PhzF protein.
       0.470
Bpro_4244
Lysine exporter protein (LYSE/YGGA).
 
     0.456
Bpro_4239
Hypothetical protein.
       0.450
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.