STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4530Hypothetical protein. (123 aa)    
Predicted Functional Partners:
Bpro_4531
Conserved hypothetical protein.
 
     0.799
Bpro_1959
Conserved hypothetical protein.
  
     0.679
Bpro_1568
Conserved hypothetical protein.
  
     0.677
Bpro_4754
Putative transmembrane protein.
  
     0.535
Bpro_0029
Conserved hypothetical protein.
  
     0.472
Bpro_2020
Extracellular solute-binding protein, family 1.
  
     0.436
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.