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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4591PpiC-type peptidyl-prolyl cis-trans isomerase. (289 aa)    
Predicted Functional Partners:
Bpro_4593
Respiratory nitrate reductase chaperone NarJ.
 
    0.900
Bpro_4592
Respiratory nitrate reductase gamma subunit.
 
  
 0.882
Bpro_4594
Respiratory nitrate reductase beta subunit.
 
    0.837
Bpro_4590
Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
 
     0.835
Bpro_4595
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.833
Bpro_4589
2-nitropropane dioxygenase, NPD.
 
     0.814
Bpro_4588
Ribonucleoside reductase.
 
     0.807
Bpro_4596
Nitrate/nitrite antiporter.
 
    0.719
Bpro_4597
Major facilitator superfamily MFS_1.
 
    0.693
Bpro_4587
Nitroreductase.
       0.629
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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