STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bpro_4727NnrS. (398 aa)    
Predicted Functional Partners:
Bpro_4724
Transcriptional regulator, BadM/Rrf2 family.
 
  
 0.847
Bpro_4726
Hypothetical protein.
       0.806
Bpro_4725
Protein of unknown function DUF59.
       0.800
Bpro_3408
Globin; Belongs to the globin family.
  
  
 0.780
Bpro_4723
Conserved hypothetical protein.
       0.733
Bpro_4728
Invasion gene expression up-regulator, SirB.
 
     0.622
Bpro_4729
Family U32 unassigned peptidase.
 
    0.607
Bpro_4593
Respiratory nitrate reductase chaperone NarJ.
 
     0.456
Bpro_1267
Cytochrome c oxidase, subunit I.
 
   
 0.433
Bpro_1168
UspA.
  
     0.421
Your Current Organism:
Polaromonas sp. JS666
NCBI taxonomy Id: 296591
Other names: P. sp. JS666
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.