Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Bpro_0442 | Bpro_4866 | Bpro_0442 | Bpro_4866 | Putative ammonia monooxygenase. | Major facilitator superfamily MFS_1. | 0.429 |
| Bpro_4864 | Bpro_4865 | Bpro_4864 | Bpro_4865 | Aminoglycoside phosphotransferase. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.643 |
| Bpro_4864 | Bpro_4866 | Bpro_4864 | Bpro_4866 | Aminoglycoside phosphotransferase. | Major facilitator superfamily MFS_1. | 0.616 |
| Bpro_4864 | lptD | Bpro_4864 | Bpro_4863 | Aminoglycoside phosphotransferase. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.856 |
| Bpro_4864 | surA | Bpro_4864 | Bpro_4862 | Aminoglycoside phosphotransferase. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.654 |
| Bpro_4865 | Bpro_4864 | Bpro_4865 | Bpro_4864 | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Aminoglycoside phosphotransferase. | 0.643 |
| Bpro_4865 | Bpro_4866 | Bpro_4865 | Bpro_4866 | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Major facilitator superfamily MFS_1. | 0.844 |
| Bpro_4865 | lptD | Bpro_4865 | Bpro_4863 | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.456 |
| Bpro_4865 | surA | Bpro_4865 | Bpro_4862 | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.431 |
| Bpro_4866 | Bpro_0442 | Bpro_4866 | Bpro_0442 | Major facilitator superfamily MFS_1. | Putative ammonia monooxygenase. | 0.429 |
| Bpro_4866 | Bpro_4864 | Bpro_4866 | Bpro_4864 | Major facilitator superfamily MFS_1. | Aminoglycoside phosphotransferase. | 0.616 |
| Bpro_4866 | Bpro_4865 | Bpro_4866 | Bpro_4865 | Major facilitator superfamily MFS_1. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.844 |
| Bpro_4866 | lptD | Bpro_4866 | Bpro_4863 | Major facilitator superfamily MFS_1. | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.450 |
| Bpro_4866 | surA | Bpro_4866 | Bpro_4862 | Major facilitator superfamily MFS_1. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.419 |
| lptD | Bpro_4864 | Bpro_4863 | Bpro_4864 | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Aminoglycoside phosphotransferase. | 0.856 |
| lptD | Bpro_4865 | Bpro_4863 | Bpro_4865 | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.456 |
| lptD | Bpro_4866 | Bpro_4863 | Bpro_4866 | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | Major facilitator superfamily MFS_1. | 0.450 |
| lptD | surA | Bpro_4863 | Bpro_4862 | Organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | 0.964 |
| surA | Bpro_4864 | Bpro_4862 | Bpro_4864 | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Aminoglycoside phosphotransferase. | 0.654 |
| surA | Bpro_4865 | Bpro_4862 | Bpro_4865 | PpiC-type peptidyl-prolyl cis-trans isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. | Protein of unknown function DUF558; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.431 |
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