Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS28290.1 | SIS28296.1 | SAMN05421639_101130 | SAMN05421639_101132 | Nucleoside-diphosphate-sugar epimerase. | Hypothetical protein. | 0.453 |
SIS28290.1 | fnr | SAMN05421639_101130 | SAMN05421639_101131 | Nucleoside-diphosphate-sugar epimerase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.551 |
SIS28290.1 | garR | SAMN05421639_101130 | SAMN05421639_101133 | Nucleoside-diphosphate-sugar epimerase. | 3-hydroxyisobutyrate dehydrogenase. | 0.447 |
SIS28290.1 | ribD | SAMN05421639_101130 | SAMN05421639_10686 | Nucleoside-diphosphate-sugar epimerase. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.624 |
SIS28296.1 | SIS28290.1 | SAMN05421639_101132 | SAMN05421639_101130 | Hypothetical protein. | Nucleoside-diphosphate-sugar epimerase. | 0.453 |
SIS28296.1 | cat3 | SAMN05421639_101132 | SAMN05421639_101134 | Hypothetical protein. | Chloramphenicol O-acetyltransferase type A. | 0.443 |
SIS28296.1 | fnr | SAMN05421639_101132 | SAMN05421639_101131 | Hypothetical protein. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.623 |
SIS28296.1 | garR | SAMN05421639_101132 | SAMN05421639_101133 | Hypothetical protein. | 3-hydroxyisobutyrate dehydrogenase. | 0.762 |
SIS28296.1 | ribD | SAMN05421639_101132 | SAMN05421639_10686 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.407 |
cat3 | SIS28296.1 | SAMN05421639_101134 | SAMN05421639_101132 | Chloramphenicol O-acetyltransferase type A. | Hypothetical protein. | 0.443 |
cat3 | garR | SAMN05421639_101134 | SAMN05421639_101133 | Chloramphenicol O-acetyltransferase type A. | 3-hydroxyisobutyrate dehydrogenase. | 0.448 |
fnr | SIS28290.1 | SAMN05421639_101131 | SAMN05421639_101130 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nucleoside-diphosphate-sugar epimerase. | 0.551 |
fnr | SIS28296.1 | SAMN05421639_101131 | SAMN05421639_101132 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Hypothetical protein. | 0.623 |
fnr | garR | SAMN05421639_101131 | SAMN05421639_101133 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 3-hydroxyisobutyrate dehydrogenase. | 0.614 |
garR | SIS28290.1 | SAMN05421639_101133 | SAMN05421639_101130 | 3-hydroxyisobutyrate dehydrogenase. | Nucleoside-diphosphate-sugar epimerase. | 0.447 |
garR | SIS28296.1 | SAMN05421639_101133 | SAMN05421639_101132 | 3-hydroxyisobutyrate dehydrogenase. | Hypothetical protein. | 0.762 |
garR | cat3 | SAMN05421639_101133 | SAMN05421639_101134 | 3-hydroxyisobutyrate dehydrogenase. | Chloramphenicol O-acetyltransferase type A. | 0.448 |
garR | fnr | SAMN05421639_101133 | SAMN05421639_101131 | 3-hydroxyisobutyrate dehydrogenase. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.614 |
ribD | SIS28290.1 | SAMN05421639_10686 | SAMN05421639_101130 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Nucleoside-diphosphate-sugar epimerase. | 0.624 |
ribD | SIS28296.1 | SAMN05421639_10686 | SAMN05421639_101132 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.407 |