STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kinB_1Two-component system, chemotaxis family, CheB/CheR fusion protein. (673 aa)    
Predicted Functional Partners:
luxQ_3
Signal transduction histidine kinase.
 
0.993
yycG_1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.946
cqsS_1
Response regulator receiver domain-containing protein.
 
  
 0.920
cheR
MCP methyltransferase, CheR-type.
  
  0.904
yycF_2
Response regulator receiver domain-containing protein.
  
  0.882
arlR
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
  
  0.874
divK
Response regulator receiver domain-containing protein.
 
 0.873
yycF_1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
 
  0.872
phoP
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.857
cusR_2
Two component transcriptional regulator, winged helix family.
  
  0.848
Your Current Organism:
Chryseobacterium shigense
NCBI taxonomy Id: 297244
Other names: C. shigense, Chryseobacterium shigense Shimomura et al. 2005 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 1107B-08, Chryseobacterium sp. 628-2-08, Chryseobacterium sp. 664-09, Chryseobacterium sp. 972B-08, DSM 17126, NCIMB 14047, strain GUM-Kaji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.