Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS29385.1 | SIS35763.1 | SAMN05421639_101449 | SAMN05421639_103406 | Peptidase family M1. | Peptidase family M28. | 0.400 |
SIS29385.1 | ywaD_2 | SAMN05421639_101449 | SAMN05421639_10160 | Peptidase family M1. | Aminopeptidase YwaD. | 0.424 |
SIS29385.1 | ywaD_3 | SAMN05421639_101449 | SAMN05421639_10159 | Peptidase family M1. | Aminopeptidase YwaD. | 0.421 |
SIS29385.1 | ywaD_4 | SAMN05421639_101449 | SAMN05421639_10158 | Peptidase family M1. | Aminopeptidase YwaD. | 0.443 |
SIS35763.1 | SIS29385.1 | SAMN05421639_103406 | SAMN05421639_101449 | Peptidase family M28. | Peptidase family M1. | 0.400 |
SIS35763.1 | pnbA_1 | SAMN05421639_103406 | SAMN05421639_104556 | Peptidase family M28. | Para-nitrobenzyl esterase. | 0.554 |
SIS35763.1 | ywaD_3 | SAMN05421639_103406 | SAMN05421639_10159 | Peptidase family M28. | Aminopeptidase YwaD. | 0.675 |
SIS35763.1 | ywaD_4 | SAMN05421639_103406 | SAMN05421639_10158 | Peptidase family M28. | Aminopeptidase YwaD. | 0.677 |
SIS50630.1 | ywaD_2 | SAMN05421639_10760 | SAMN05421639_10160 | Protein involved in gliding motility GldI. | Aminopeptidase YwaD. | 0.414 |
SIS50630.1 | ywaD_3 | SAMN05421639_10760 | SAMN05421639_10159 | Protein involved in gliding motility GldI. | Aminopeptidase YwaD. | 0.409 |
SIS50630.1 | ywaD_4 | SAMN05421639_10760 | SAMN05421639_10158 | Protein involved in gliding motility GldI. | Aminopeptidase YwaD. | 0.428 |
ggt | ywaD_4 | SAMN05421639_102157 | SAMN05421639_10158 | Gamma-glutamyltranspeptidase / glutathione hydrolase. | Aminopeptidase YwaD. | 0.408 |
pnbA_1 | SIS35763.1 | SAMN05421639_104556 | SAMN05421639_103406 | Para-nitrobenzyl esterase. | Peptidase family M28. | 0.554 |
pnbA_1 | ywaD_2 | SAMN05421639_104556 | SAMN05421639_10160 | Para-nitrobenzyl esterase. | Aminopeptidase YwaD. | 0.554 |
pnbA_1 | ywaD_3 | SAMN05421639_104556 | SAMN05421639_10159 | Para-nitrobenzyl esterase. | Aminopeptidase YwaD. | 0.554 |
pnbA_1 | ywaD_4 | SAMN05421639_104556 | SAMN05421639_10158 | Para-nitrobenzyl esterase. | Aminopeptidase YwaD. | 0.554 |
ywaD_2 | SIS29385.1 | SAMN05421639_10160 | SAMN05421639_101449 | Aminopeptidase YwaD. | Peptidase family M1. | 0.424 |
ywaD_2 | SIS50630.1 | SAMN05421639_10160 | SAMN05421639_10760 | Aminopeptidase YwaD. | Protein involved in gliding motility GldI. | 0.414 |
ywaD_2 | pnbA_1 | SAMN05421639_10160 | SAMN05421639_104556 | Aminopeptidase YwaD. | Para-nitrobenzyl esterase. | 0.554 |
ywaD_2 | ywaD_3 | SAMN05421639_10160 | SAMN05421639_10159 | Aminopeptidase YwaD. | Aminopeptidase YwaD. | 0.696 |
page 1 of 2