Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS28160.1 | SIS28163.1 | SAMN05421639_10192 | SAMN05421639_10193 | Outer membrane protein beta-barrel domain-containing protein. | Opacity protein. | 0.423 |
SIS28160.1 | SIS29951.1 | SAMN05421639_10192 | SAMN05421639_101661 | Outer membrane protein beta-barrel domain-containing protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.447 |
SIS28160.1 | SIS31083.1 | SAMN05421639_10192 | SAMN05421639_1011124 | Outer membrane protein beta-barrel domain-containing protein. | Membrane protein YfhO. | 0.506 |
SIS28160.1 | SIS32152.1 | SAMN05421639_10192 | SAMN05421639_102103 | Outer membrane protein beta-barrel domain-containing protein. | Iron complex outermembrane recepter protein. | 0.427 |
SIS28160.1 | SIS45844.1 | SAMN05421639_10192 | SAMN05421639_105291 | Outer membrane protein beta-barrel domain-containing protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.532 |
SIS28160.1 | SIS45851.1 | SAMN05421639_10192 | SAMN05421639_105292 | Outer membrane protein beta-barrel domain-containing protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.554 |
SIS28160.1 | SIS56455.1 | SAMN05421639_10192 | SAMN05421639_10861 | Outer membrane protein beta-barrel domain-containing protein. | Protein of unknown function. | 0.439 |
SIS28160.1 | secA_1 | SAMN05421639_10192 | SAMN05421639_10553 | Outer membrane protein beta-barrel domain-containing protein. | Protein translocase subunit secA. | 0.424 |
SIS28163.1 | SIS28160.1 | SAMN05421639_10193 | SAMN05421639_10192 | Opacity protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.423 |
SIS28163.1 | SIS29951.1 | SAMN05421639_10193 | SAMN05421639_101661 | Opacity protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.455 |
SIS28163.1 | SIS31083.1 | SAMN05421639_10193 | SAMN05421639_1011124 | Opacity protein. | Membrane protein YfhO. | 0.600 |
SIS28163.1 | SIS32152.1 | SAMN05421639_10193 | SAMN05421639_102103 | Opacity protein. | Iron complex outermembrane recepter protein. | 0.441 |
SIS28163.1 | SIS35496.1 | SAMN05421639_10193 | SAMN05421639_103306 | Opacity protein. | TonB-linked outer membrane protein, SusC/RagA family. | 0.470 |
SIS28163.1 | SIS45291.1 | SAMN05421639_10193 | SAMN05421639_105219 | Opacity protein. | Ig-like domain-containing protein. | 0.437 |
SIS28163.1 | SIS45844.1 | SAMN05421639_10193 | SAMN05421639_105291 | Opacity protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.539 |
SIS28163.1 | SIS45851.1 | SAMN05421639_10193 | SAMN05421639_105292 | Opacity protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.577 |
SIS28163.1 | SIS56455.1 | SAMN05421639_10193 | SAMN05421639_10861 | Opacity protein. | Protein of unknown function. | 0.455 |
SIS28163.1 | secA_1 | SAMN05421639_10193 | SAMN05421639_10553 | Opacity protein. | Protein translocase subunit secA. | 0.424 |
SIS29951.1 | SIS28160.1 | SAMN05421639_101661 | SAMN05421639_10192 | TonB-linked outer membrane protein, SusC/RagA family. | Outer membrane protein beta-barrel domain-containing protein. | 0.447 |
SIS29951.1 | SIS28163.1 | SAMN05421639_101661 | SAMN05421639_10193 | TonB-linked outer membrane protein, SusC/RagA family. | Opacity protein. | 0.455 |
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