STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_93-oxoacyl-[acyl-carrier protein] reductase. (237 aa)    
Predicted Functional Partners:
fabD_2
[acyl-carrier-protein] S-malonyltransferase.
  
 0.840
phaJ
3-oxoacyl-[acyl-carrier protein] reductase.
  
  0.835
SIS35610.1
Acyl carrier protein.
  
 
  0.823
fabG_5
3-oxoacyl-[acyl-carrier protein] reductase.
  
  
  0.797
SIS35924.1
Amino acid adenylation domain-containing protein.
  
 0.796
SIS62458.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.796
fabG_8
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.786
acr1_1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.761
SIS33267.1
Glucose 1-dehydrogenase.
  
     0.752
SIS30550.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.749
Your Current Organism:
Chryseobacterium shigense
NCBI taxonomy Id: 297244
Other names: C. shigense, Chryseobacterium shigense Shimomura et al. 2005 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 1107B-08, Chryseobacterium sp. 628-2-08, Chryseobacterium sp. 664-09, Chryseobacterium sp. 972B-08, DSM 17126, NCIMB 14047, strain GUM-Kaji
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