Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SIS34806.1 | SIS34811.1 | SAMN05421639_10378 | SAMN05421639_10380 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 0.994 |
| SIS34806.1 | boxD | SAMN05421639_10378 | SAMN05421639_10371 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. | 0.916 |
| SIS34806.1 | echA8_1 | SAMN05421639_10378 | SAMN05421639_10377 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.967 |
| SIS34806.1 | hmp_1 | SAMN05421639_10378 | SAMN05421639_107184 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.988 |
| SIS34806.1 | hmp_2 | SAMN05421639_10378 | SAMN05421639_10382 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.991 |
| SIS34806.1 | paaA | SAMN05421639_10378 | SAMN05421639_10381 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.990 |
| SIS34806.1 | paaC | SAMN05421639_10378 | SAMN05421639_10379 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.993 |
| SIS34806.1 | paaI | SAMN05421639_10378 | SAMN05421639_10375 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | acyl-CoA thioesterase. | 0.985 |
| SIS34806.1 | paaK_1 | SAMN05421639_10378 | SAMN05421639_10383 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.969 |
| SIS34806.1 | paaK_2 | SAMN05421639_10378 | SAMN05421639_105243 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | phenylacetate-CoA ligase. | 0.930 |
| SIS34811.1 | SIS34806.1 | SAMN05421639_10380 | SAMN05421639_10378 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. | 0.994 |
| SIS34811.1 | boxD | SAMN05421639_10380 | SAMN05421639_10371 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. | 0.929 |
| SIS34811.1 | echA8_1 | SAMN05421639_10380 | SAMN05421639_10377 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.950 |
| SIS34811.1 | hmp_1 | SAMN05421639_10380 | SAMN05421639_107184 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.990 |
| SIS34811.1 | hmp_2 | SAMN05421639_10380 | SAMN05421639_10382 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.994 |
| SIS34811.1 | paaA | SAMN05421639_10380 | SAMN05421639_10381 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. | 0.998 |
| SIS34811.1 | paaC | SAMN05421639_10380 | SAMN05421639_10379 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. | 0.998 |
| SIS34811.1 | paaI | SAMN05421639_10380 | SAMN05421639_10375 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | acyl-CoA thioesterase. | 0.983 |
| SIS34811.1 | paaK_1 | SAMN05421639_10380 | SAMN05421639_10383 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.973 |
| SIS34811.1 | paaK_2 | SAMN05421639_10380 | SAMN05421639_105243 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. | phenylacetate-CoA ligase. | 0.933 |
page 1 of 6