STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS37095.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
SIS37099.1
Hypothetical protein.
 
    
0.653
SIS37091.1
Hypothetical protein.
 
    
0.638
SIS35460.1
Hypothetical protein.
  
     0.588
SIS37086.1
Hypothetical protein.
 
     0.506
SIS37081.1
Hypothetical protein.
 
     0.502
SIS37077.1
Hypothetical protein.
 
     0.482
SIS37700.1
Hypothetical protein.
  
     0.480
SIS35972.1
Hypothetical protein.
  
     0.467
SIS38868.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.419
SIS38639.1
Hypothetical protein.
  
     0.414
Your Current Organism:
Chryseobacterium shigense
NCBI taxonomy Id: 297244
Other names: C. shigense, Chryseobacterium shigense Shimomura et al. 2005 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 1107B-08, Chryseobacterium sp. 628-2-08, Chryseobacterium sp. 664-09, Chryseobacterium sp. 972B-08, DSM 17126, NCIMB 14047, strain GUM-Kaji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.