Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS41135.1 | mepA | SAMN05421639_104639 | SAMN05421639_104640 | Ribosomal small subunit protein bTHX. | Putative efflux protein, MATE family. | 0.548 |
SIS41154.1 | mepA | SAMN05421639_104641 | SAMN05421639_104640 | Ankyrin repeat-containing protein. | Putative efflux protein, MATE family. | 0.567 |
crtM | gapA | SAMN05421639_101530 | SAMN05421639_104433 | Phytoene/squalene synthetase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.720 |
crtM | mepA | SAMN05421639_101530 | SAMN05421639_104640 | Phytoene/squalene synthetase. | Putative efflux protein, MATE family. | 0.636 |
crtM | rpsA | SAMN05421639_101530 | SAMN05421639_102255 | Phytoene/squalene synthetase. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.664 |
gapA | crtM | SAMN05421639_104433 | SAMN05421639_101530 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Phytoene/squalene synthetase. | 0.720 |
gapA | mepA | SAMN05421639_104433 | SAMN05421639_104640 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Putative efflux protein, MATE family. | 0.595 |
gapA | rpsA | SAMN05421639_104433 | SAMN05421639_102255 | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.654 |
mepA | SIS41135.1 | SAMN05421639_104640 | SAMN05421639_104639 | Putative efflux protein, MATE family. | Ribosomal small subunit protein bTHX. | 0.548 |
mepA | SIS41154.1 | SAMN05421639_104640 | SAMN05421639_104641 | Putative efflux protein, MATE family. | Ankyrin repeat-containing protein. | 0.567 |
mepA | crtM | SAMN05421639_104640 | SAMN05421639_101530 | Putative efflux protein, MATE family. | Phytoene/squalene synthetase. | 0.636 |
mepA | gapA | SAMN05421639_104640 | SAMN05421639_104433 | Putative efflux protein, MATE family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.595 |
mepA | rpsA | SAMN05421639_104640 | SAMN05421639_102255 | Putative efflux protein, MATE family. | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.585 |
rpsA | crtM | SAMN05421639_102255 | SAMN05421639_101530 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Phytoene/squalene synthetase. | 0.664 |
rpsA | gapA | SAMN05421639_102255 | SAMN05421639_104433 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.654 |
rpsA | mepA | SAMN05421639_102255 | SAMN05421639_104640 | SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | Putative efflux protein, MATE family. | 0.585 |