STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41716.1Hypothetical protein. (325 aa)    
Predicted Functional Partners:
SIS41722.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.782
SIS41729.1
Protein of unknown function.
       0.658
SIS41707.1
Glycosyltransferase involved in cell wall bisynthesis.
  
    0.579
SIS29446.1
Hypothetical protein.
  
     0.578
SIS45157.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.443
SIS38737.1
CarboxypepD_reg-like domain-containing protein.
  
     0.410
Your Current Organism:
Chryseobacterium shigense
NCBI taxonomy Id: 297244
Other names: C. shigense, Chryseobacterium shigense Shimomura et al. 2005 emend. Montero-Calasanz et al. 2014, Chryseobacterium sp. 1107B-08, Chryseobacterium sp. 628-2-08, Chryseobacterium sp. 664-09, Chryseobacterium sp. 972B-08, DSM 17126, NCIMB 14047, strain GUM-Kaji
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.