A0A0D2LXD6 protein (Gossypium raimondii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0D2LXD6

Uncharacterized protein; Belongs to the cytochrome P450 family. (491 aa)

Predicted Functional Partners:

A0A0D2PQL4

0.700

A0A0D2RUK0

0.700

A0A0D2TFL0

0.700

A0A0D2UID7

0.700

A0A0D2SC63

0.510

A0A0D2SP19

0.507

A0A0D2S6K3

0.502

A0A0D2Q7T2

0.455

A0A0D2QM81

0.450

A0A0D2Q7T9

0.447

Your Current Organism:

Gossypium raimondii

NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0D2LXD6	A0A0D2PQL4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.700
A0A0D2LXD6	A0A0D2Q7T2	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.455
A0A0D2LXD6	A0A0D2Q7T9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.447
A0A0D2LXD6	A0A0D2QM81	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.450
A0A0D2LXD6	A0A0D2RUK0	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.700
A0A0D2LXD6	A0A0D2S6K3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.502
A0A0D2LXD6	A0A0D2SC63	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.510
A0A0D2LXD6	A0A0D2SP19	Uncharacterized protein; Belongs to the cytochrome P450 family.	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.	0.507
A0A0D2LXD6	A0A0D2TFL0	Uncharacterized protein; Belongs to the cytochrome P450 family.	FAD-binding PCMH-type domain-containing protein.	0.700
A0A0D2LXD6	A0A0D2UID7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.700
A0A0D2PQL4	A0A0D2LXD6	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.700
A0A0D2PQL4	A0A0D2S6K3	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A0D2PQL4	A0A0D2SC63	Uncharacterized protein.	Uncharacterized protein.	0.414
A0A0D2PQL4	A0A0D2SP19	Uncharacterized protein.	Zeaxanthin epoxidase, chloroplastic; Converts zeaxanthin into antheraxanthin and subsequently violaxanthin.	0.653
A0A0D2Q7T2	A0A0D2LXD6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.455
A0A0D2Q7T2	A0A0D2SC63	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.510
A0A0D2Q7T9	A0A0D2LXD6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.447
A0A0D2Q7T9	A0A0D2SC63	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.510
A0A0D2QM81	A0A0D2LXD6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.450
A0A0D2QM81	A0A0D2SC63	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.503