STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2MBB8Uncharacterized protein. (168 aa)    
Predicted Functional Partners:
A0A0D2VFI4
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.985
A0A0D2NA85
Uncharacterized protein.
   
 0.950
A0A0D2TTY5
Uncharacterized protein.
   
 0.944
A0A0D2R2V2
Uncharacterized protein.
   
 0.943
A0A0D2T8Q2
Uncharacterized protein.
   
 
 0.891
A0A0D2PE64
Uncharacterized protein.
   
 
 0.887
A0A0D2QR65
Uncharacterized protein.
   
 
 0.881
A0A0D2SFR6
Uncharacterized protein.
   
 
 0.870
A0A0D2PMQ4
Uncharacterized protein.
   
 
 0.868
A0A0D2RWB5
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 0.868
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.