STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2ME56Uncharacterized protein. (464 aa)    
Predicted Functional Partners:
A0A0D2SCU5
Reticulon-like protein.
  
     0.529
A0A0D2NC82
Uncharacterized protein.
  
     0.527
A0A0D2TZY9
GRAM domain-containing protein.
  
     0.520
A0A0D2Q447
Uncharacterized protein.
  
     0.519
A0A0D2PDZ5
GRAM domain-containing protein.
  
     0.517
A0A0D2MWT3
Uncharacterized protein.
  
     0.516
A0A0D2NTW7
GRAM domain-containing protein.
  
     0.516
A0A0D2RLG1
Uncharacterized protein.
  
     0.516
A0A0D2T2Z5
Uncharacterized protein.
  
     0.515
A0A0D2RKI9
GRAM domain-containing protein.
  
     0.514
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.