STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2P7I5SBP-type domain-containing protein. (985 aa)    
Predicted Functional Partners:
A0A0D2R526
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.711
A0A0D2V3U3
DNA_pol_E_B domain-containing protein.
    
 0.708
A0A0D2V4K0
Uncharacterized protein.
    
 0.708
A0A0D2TT53
ERCC4 domain-containing protein.
    
 0.707
A0A0D2TGA0
Sm domain-containing protein.
    
  0.680
A0A0D2P3Y4
Protein kinase domain-containing protein.
   
 0.655
A0A0D2S775
Small nuclear ribonucleoprotein Sm D2.
    
 0.615
A0A0D2TG25
Small nuclear ribonucleoprotein Sm D2.
    
 0.615
A0A0D2VG53
DNA polymerase.
   
 0.615
A0A0D2R6C3
WD_REPEATS_REGION domain-containing protein.
   
 
 0.577
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.