Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2PBY0WRKY transcription factor. (288 aa)    
Predicted Functional Partners:
A0A0D2T5D8
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins.
      
 0.510
A0A0D2VJV5
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins.
      
 0.510
A0A0D2SY95
Uncharacterized protein.
     
 0.448
A0A0D2TFU0
Uncharacterized protein.
     
 0.448
A0A0D2NC90
Uncharacterized protein.
      
 0.435
A0A0D2TKH0
Uncharacterized protein; Belongs to the GST superfamily.
    
 0.431
A0A0D2TPP1
HTH myb-type domain-containing protein.
      
 0.425
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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