STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2PYF3Uncharacterized protein. (344 aa)    
Predicted Functional Partners:
A0A0D2UB24
NAC domain-containing protein.
  
     0.505
A0A0D2Q0D2
Uncharacterized protein.
  
     0.504
A0A0D2S0F9
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.504
A0A0D2T6X2
Uncharacterized protein.
  
     0.497
A0A0D2S7H9
MACPF domain-containing protein.
  
     0.490
A0A0D2PTI9
MACPF domain-containing protein.
  
     0.488
A0A0D2VAH2
NAC domain-containing protein.
  
     0.481
A0A0D2RI71
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.479
A0A0D2QVT3
NAC domain-containing protein.
  
     0.476
A0A0D2TV45
NAC domain-containing protein.
  
     0.464
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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