STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2Q2U2Pectate lyase. (379 aa)    
Predicted Functional Partners:
A0A0D2S634
Uncharacterized protein.
     
 0.709
A0A0D2V8V0
Uncharacterized protein.
     
 0.709
A0A0D2V8V5
Uncharacterized protein.
     
 0.709
A0A0D2NSD9
Uncharacterized protein.
     
 0.708
A0A0D2R4U4
Uncharacterized protein.
     
 0.708
A0A0D2VQ82
Uncharacterized protein.
     
 0.702
A0A0D2NC19
Uncharacterized protein.
     
 0.696
A0A0D2S5S2
Uncharacterized protein.
     
 0.696
A0A0D2UWE9
Uncharacterized protein.
     
 0.696
A0A0D2VYI0
Uncharacterized protein.
     
 0.696
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.