STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2QBN7AAA domain-containing protein; Belongs to the AAA ATPase family. (617 aa)    
Predicted Functional Partners:
A0A0D2RQ07
Prohibitin.
   
 0.773
A0A0D2VKC9
Prohibitin.
   
 0.773
A0A0D2RIG4
Prohibitin.
   
 0.755
A0A0D2NA85
Uncharacterized protein.
   
 
 0.696
A0A0D2UBP3
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.617
A0A0D2QR65
Uncharacterized protein.
   
   0.612
A0A0D2MA86
Uncharacterized protein.
  
 
 0.586
A0A0D2Q342
Uncharacterized protein.
  
 
 0.586
A0A0D2S5I6
Uncharacterized protein.
    
   0.582
A0A0D2Q790
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 
 0.574
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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