STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2QD20Uncharacterized protein. (747 aa)    
Predicted Functional Partners:
A0A0D2SIH5
Uncharacterized protein.
   
 0.998
A0A0D2QBQ4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.997
A0A0D2RUJ1
POP4 domain-containing protein.
   
 0.972
A0A0D2R2P9
DUF4477 domain-containing protein.
   
 
 0.959
A0A0D2LQS8
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
    
 0.941
A0A0D2QNZ4
Uncharacterized protein.
    
 0.941
A0A0D2N8L7
Uncharacterized protein.
   
 
 0.934
A0A0D2PT23
Uncharacterized protein.
   
 
 0.927
A0A0D2UWX0
Uncharacterized protein.
   
 
 0.927
A0A0D2S737
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.904
Your Current Organism:
Gossypium raimondii
NCBI taxonomy Id: 29730
Other names: G. raimondii, Gossypium raimondii Ulbr.
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